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Structure of a calcium-deficient form of influenza virus neuraminidase: Implications for substrate binding

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dc.contributor.author Smith, BJ en
dc.contributor.author Huyton, T en
dc.contributor.author Joosten, RP en
dc.contributor.author McKimm-Breschkin, JL en
dc.contributor.author Zhang, J-G en
dc.contributor.author Luo, CS en
dc.contributor.author Lou, M-Z en
dc.contributor.author Labrou, NE en
dc.contributor.author Garrett, TPJ en
dc.date.accessioned 2014-06-06T06:47:14Z
dc.date.available 2014-06-06T06:47:14Z
dc.date.issued 2006 en
dc.identifier.issn 09074449 en
dc.identifier.uri http://dx.doi.org/10.1107/S0907444906020063 en
dc.identifier.uri http://62.217.125.90/xmlui/handle/123456789/3475
dc.subject.other calcium en
dc.subject.other ion en
dc.subject.other sialidase en
dc.subject.other sulfate en
dc.subject.other animal en
dc.subject.other article en
dc.subject.other binding site en
dc.subject.other chemical model en
dc.subject.other chemical structure en
dc.subject.other chemistry en
dc.subject.other enzymology en
dc.subject.other Orthomyxovirus en
dc.subject.other protein binding en
dc.subject.other protein conformation en
dc.subject.other virology en
dc.subject.other whale en
dc.subject.other X ray en
dc.subject.other X ray crystallography en
dc.subject.other Animals en
dc.subject.other Binding Sites en
dc.subject.other Calcium en
dc.subject.other Crystallography, X-Ray en
dc.subject.other Ions en
dc.subject.other Models, Chemical en
dc.subject.other Models, Molecular en
dc.subject.other Neuraminidase en
dc.subject.other Orthomyxoviridae en
dc.subject.other Protein Binding en
dc.subject.other Protein Conformation en
dc.subject.other Sulfates en
dc.subject.other Whales en
dc.subject.other X-Rays en
dc.subject.other Cetacea en
dc.subject.other Orthomyxoviridae en
dc.title Structure of a calcium-deficient form of influenza virus neuraminidase: Implications for substrate binding en
heal.type journalArticle en
heal.identifier.primary 10.1107/S0907444906020063 en
heal.publicationDate 2006 en
heal.abstract The X-ray structure of influenza virus neuraminidase (NA) isolated from whale, subtype N9, has been determined at 2.2 Å resolution and contains a tetrameric protein in the asymmetric unit. In structures of NA determined previously, a calcium ion is observed to coordinate amino acids near the substrate-binding site. In three of the NA monomers determined here this calcium is absent, resulting in structural alterations near the substrate-binding site. These changes affect the conformation of residues that participate in several key interactions between the enzyme and substrate and provide at a molecular level the basis of the structural and functional role of calcium in substrate and inhibitor binding. Several sulfate ions were identified in complex with the protein. These are located in the active site, occupying the space reserved for the substrate (sialic acid) carboxylate, and in positions leading away from the substrate-binding site. These sites offer a new opportunity for the design of inhibitors of influenza virus NA. © 2006 International Union of Crystallography - all rights reserved. en
heal.journalName Acta Crystallographica Section D: Biological Crystallography en
dc.identifier.issue 9 en
dc.identifier.volume 62 en
dc.identifier.doi 10.1107/S0907444906020063 en
dc.identifier.spage 947 en
dc.identifier.epage 952 en


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