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Estimating genetic diversity in Greek durum wheat landraces with RAPD markers

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dc.contributor.author Mantzavinou, A en
dc.contributor.author Bebeli, PJ en
dc.contributor.author Kaltsikes, PJ en
dc.date.accessioned 2014-06-06T06:46:31Z
dc.date.available 2014-06-06T06:46:31Z
dc.date.issued 2005 en
dc.identifier.issn 00049409 en
dc.identifier.uri http://dx.doi.org/10.1071/AR04245 en
dc.identifier.uri http://62.217.125.90/xmlui/handle/123456789/3051
dc.subject Biodiversity en
dc.subject Dendrogram en
dc.subject DNA markers en
dc.subject Genetic relationships en
dc.subject Germplasm en
dc.subject Plant genetic resources en
dc.subject.other genetic analysis en
dc.subject.other genetic variation en
dc.subject.other wheat en
dc.subject.other Triticum aestivum en
dc.subject.other Triticum monococcum en
dc.subject.other Triticum turgidum en
dc.subject.other Triticum turgidum subsp. durum en
dc.title Estimating genetic diversity in Greek durum wheat landraces with RAPD markers en
heal.type journalArticle en
heal.identifier.primary 10.1071/AR04245 en
heal.publicationDate 2005 en
heal.abstract Using the random amplified polymorphic DNA (RAPD) method, the genetic diversity of 19 Greek landraces and 9 cultivars of durum wheat [Triticum turgidum L. var. durum (Desf.)] was studied. Two commercial bread wheat (Triticum aestivum L.) cultivars and one genotype of Triticum monococcum L. were also included in the study. Eighty-seven arbitrary primers (10-mer) were evaluated in a preliminary experiment and 15 of them were selected for the main experiments based on the quality and reliability of their amplification and the polymorphism they revealed. A total of 150 DNA bands were obtained, 125 (83.3%) of which were polymorphic. On average, 10 DNA bands were amplified per primer, 8.3 of which were polymorphic. The genetic similarity between all pairs of genotypes was evaluated using the Jaccard's or Nei and Li's coefficients; the values of the former ranged from 0.153 to 0.973 while those of the latter were slightly higher (0.265-0.986). Cluster analysis was conducted by the UPGMA and the Njoin methods. Both methods broadly placed 26 durum genotypes into 1 branch while the other branch consisted of 2 subgroups: 1 included the 2 bread wheat cultivars; the other 1 consisted of 2 durum landraces, 'Kontopouli' and 'Mavrotheri-Chios', which showed an intruiging behaviour sharing bands with the bread wheat cultivars. The T. monococcum cultivar stood apart from all other genotypes. © CSIRO 2005. en
heal.journalName Australian Journal of Agricultural Research en
dc.identifier.issue 12 en
dc.identifier.volume 56 en
dc.identifier.doi 10.1071/AR04245 en
dc.identifier.spage 1355 en
dc.identifier.epage 1364 en


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