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Functional constraints of the Cu,Zn superoxide dismutase in species of the Drosophila melanogaster subgroup and phylogenetic analysis

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dc.contributor.author Arhontaki, K en
dc.contributor.author Eliopoulos, E en
dc.contributor.author Goulielmos, G en
dc.contributor.author Kastanis, P en
dc.contributor.author Tsakas, S en
dc.contributor.author Loukas, M en
dc.contributor.author Ayala, F en
dc.date.accessioned 2014-06-06T06:45:03Z
dc.date.available 2014-06-06T06:45:03Z
dc.date.issued 2002 en
dc.identifier.issn 00222844 en
dc.identifier.uri http://dx.doi.org/10.1007/s00239-002-2370-9 en
dc.identifier.uri http://62.217.125.90/xmlui/handle/123456789/2223
dc.subject 3D structure en
dc.subject Amino acid sequence en
dc.subject Cu,Zn SOD en
dc.subject Drosophila melanogaster subgroup en
dc.subject Phylogeny en
dc.subject.other copper zinc superoxide dismutase en
dc.subject.other genomic DNA en
dc.subject.other DNA en
dc.subject.other superoxide dismutase en
dc.subject.other article en
dc.subject.other Drosophila melanogaster en
dc.subject.other molecular cloning en
dc.subject.other nonhuman en
dc.subject.other nucleotide sequence en
dc.subject.other phylogeny en
dc.subject.other polymerase chain reaction en
dc.subject.other species difference en
dc.subject.other amino acid sequence en
dc.subject.other animal en
dc.subject.other enzymology en
dc.subject.other genetics en
dc.subject.other metabolism en
dc.subject.other molecular genetics en
dc.subject.other sequence homology en
dc.subject.other Bos taurus en
dc.subject.other Drosophila melanogaster en
dc.subject.other Melanogaster en
dc.subject.other Xenopus laevis en
dc.subject.other Amino Acid Sequence en
dc.subject.other Animals en
dc.subject.other Base Sequence en
dc.subject.other DNA en
dc.subject.other Drosophila melanogaster en
dc.subject.other Molecular Sequence Data en
dc.subject.other Phylogeny en
dc.subject.other Sequence Homology, Amino Acid en
dc.subject.other Species Specificity en
dc.subject.other Superoxide Dismutase en
dc.title Functional constraints of the Cu,Zn superoxide dismutase in species of the Drosophila melanogaster subgroup and phylogenetic analysis en
heal.type journalArticle en
heal.identifier.primary 10.1007/s00239-002-2370-9 en
heal.publicationDate 2002 en
heal.abstract The phylogenetic relationships among the Drosophila melanogaster subgroup species were analyzed using approximately 1550-nucleotide-long sequences of the Cu,Zn SOD gene. Phylogenetic analysis was performed using separately the whole region and the intron sequences of the gene. The resulting phylogenetic trees reveal virtually the same topology, separating the species into distinct clusters. The inferred topology generally agrees with previously proposed classifications based on morphological and molecular data. The amino acid sequences of the Cu,Zn SOD of the D. melanogaster subgroup species reveal a high-conservation pattern. Only 3.9% of the total amino acid sites are variable, and none affects the major structural elements. Comparison of the Drosophila Cu,Zn SOD amino acid sequences with the Cu,Zn SOD of Bos taurus and Xenopus laevis (whose three-dimensional structure has been elucidated) reveals conservation of all the protein's functionally important amino acids and no substitutions that dramatically change the charge or the polarity of the amino acids. en
heal.journalName Journal of Molecular Evolution en
dc.identifier.issue 6 en
dc.identifier.volume 55 en
dc.identifier.doi 10.1007/s00239-002-2370-9 en
dc.identifier.spage 745 en
dc.identifier.epage 756 en


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